EvolutionMay 17, 2007 9:22 pm

There is a very interesting feature this month in PLoS biology that talks about one of my favourite themes.

The article is pretty neat and I’m not going to make any comments on it. What interests the most is the seemingly opposed lines of thought that some prominent biologists let’s say “represent”:

- Ernst Mayr, an adamantly defender of biology as an autonomous science, for whom living organisms could not be reduced to laws of physics and pure chemistry.

- Francis Crick who clearly stated that the ultimate aim of biology is to be explained in terms of chemistry and physics.

I think that this two points of view are radical and misleading. I see it as the old debate of nature VS nurture. Nowadays it’s clear that the phenotypic traits of an organism cannot be reduced to only genes or only environment. Something similar applies to this question. Basic physics laws and emergent properties are intertwined in living organisms and the tasks of biologists is to unravel to which extent each of them are involved in the “making” of a living organism.

I might be wrong, but I don’t think we’re that close from pure chemistry and physics nor we have that many, let’s say, “traits” that make us (living things) particularly special.

MicrobiologyMay 11, 2007 12:32 am

…save the world?

This week in nature news there’s an article about the relevance of keeping the microbes that live on earth alive.

Well, if they wanna save the microbes they have a loooooong way to go. But it sounds cool on a t-shirt.

OtherMay 10, 2007 3:37 pm

Hey!

Is anybody from the blogosphere going to Toronto to the ASM general meeting?

I’ll be presenting a poster there.

Send me an e-mail or something if you’re going and we can have a pint after the talks.

Viva la evolucion!

Evolution, MicrobiologyApril 30, 2007 6:26 pm

This week in the Research Highlights of Nature David Wilkinson talks in the journal club about the possible evolution of the aversion to rotten food. He argues that one possible reason for microbes to produce the stinky compounds is to fend off animals, that would otherwise eat the food, probably digesting the previous bacterial dwellers.

I honestly think that this explanation stretches a little bit the “eukaryocentric” point of view. I doubt microorganisms produce a compound to avoid you eating their food. It simply makes more sense that the ability to differentiate between rotten and fresh food arose with the “need” to avoid contaminated aliments that might cause you some disease. I don’t know, that’s what I always thought.

Also one of the main compounds (sulfide) that hits you to the very bone marrow is a waste product from the metabolism of amino acids with sulfur groups so we’re talking about a by-product not an actively synthesized compound.

OtherApril 25, 2007 3:36 pm

Tangled Bank 78 is up at About Archaeology.

Evolution, MicrobiologyApril 19, 2007 10:07 pm

Wolbachia is an interesting microorganism (like most… like all). To date it was known to be a parasite that it is maternally transmitted. It had been shown that infection with this microorganism reduced fecundity in its hosts.

Wolbachia

The way how populations are maintained is through Citoplasmic Incompatibility (CI). CI basically prevents the embryo from developing if the male mates with an uninfected female, or the the females carry a different strain of Wolbachia.

This poses a clear evolutionary question: Would the “virulence” of Wolbachia decrease over time?. This would benefit its hosts which would increase the numbers of the mutualistic strains.

This week there is a paper published in PLoS that describes an example of evolution in action.

A group of researchers have found that in only 20 years Wolbachia has passed from reducing the fecundity of females in a 20% to increasing it a 10%!

Viva la Evolucion!

OtherApril 16, 2007 12:56 am

After some requests from friends and some readers, and also cause I wanted a t-shirt with Carlitos Darwin on it, I have opened an on-line shop at cafepress

The prices you see are the minimum they allow me to charge (they get all the benefits) and I don’t get a penny out of it, but is fun.

So bring your geek out and get a t-shirt to show off the evolutionary within you.

Salu!

Evolution, MicrobiologyApril 15, 2007 12:05 am

B. aphidicola is an endosymbiont of aphids (sap sucking insects). This bacterium lives in specialised cells called bacteriocytes and stablishes an symbiotic relationship with its host. They get shelter and food, and they provide aminoacids that are not found in the aphid’s strict diet.

That’s kind of the straightforward anwser to why the aphids harbor this guys. The interesting thing is that in some other cases the endosymbiont present in other insects don’t show a clear “function”. Basically, other antibiotic treated species of insects that have endosymbionts have been shown not to have any “visible” problem after the removal of them. For instance, this applies to Blochmania floridanus and its ant host Camponotus.

In a recent paper published in PLoS Biology Nancy Moran’s team found an unexpected “function” of Buchnera.

They found that some buchnera strains upregulate a heat-shock protein when exposure to 35C and some strains didn’t. The reason for that, is a single-point mutation in the promoter of the gene that encodes the heat-shock protein. The strains with the missing nucleotide didn’t upregulate the gene.

Here comes the good stuff: When they exposed two groups of juniles aphids (one with each strain) at 35C for four hours, few of the ones with the nucleotide missing strains could reproduce afterwards, whereas the others encountered no problem. Also the aphids bearing bacteria with short promoters weighed less as adults.

Even more interesting! strains from Arizona showed no mutations whereas strains from cooler areas had a third of the populations carrying the shorter promoters.

Might this confer advantage in cooler climates… YES!
They found that the opposite is true when the aphids are exposed at 15C.The aphids with Buchnera strains that carried the mutation produced progeny faster than the ones bearing strains with longer promoters.

That’s absolutely fantastic!

How can the upregulation of heat-shock genes affect so drastically (only four hours of exposure) the aphids?
This is a beautiful example of how the question is the most important part of the research, what do you call function (like in the case of Blochmania and Camponotus? what are the normal conditions?

How much left to be known. How much left to be known. I love it!!

OtherApril 11, 2007 4:15 pm

Tangled Bank is up at Aetiology!

EvolutionApril 9, 2007 9:29 pm

…chromosomes.

It is known that humans and Drosophila “buffer” their double dose of sexual chromosomes (females have two X chromosomes whereas males have only one). Basically one of the two X chromosomes becomes inactive during development.

This week there is a paper published in the Journal of Biology that shows that birds behave differently “sexualchromosomicallywise”. In the case of birds, males are the ones with the double dose. But in this case both chromosomes are active, in fact males express sex-linked genes at higher levels than females.

It’s speculated that this might be involved in the generation of sexual dimorfism.